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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9680618 chr22:29566978 C/T TXN2 chr22:36863083-36878077:- -0.41 -6.7 5.76E-11 Box Plot
THCA rs9680698 chr22:32234906 C/T DNAL4 chr22:39174513-39190203:- -0.61 -5.98 4.44E-9 Box Plot
THCA rs9680698 chr22:32234906 C/T NHP2L1 chr22:42069934-42086508:- -0.64 -6.46 2.6E-10 Box Plot
THCA rs9680698 chr22:32234906 C/T SNRPD3 chr22:24951471-25005947:+ -0.56 -5.97 4.73E-9 Box Plot
THCA rs9680792 chr22:24006101 A/C IGLL3 chr22:25713888-25716191:+ 0.67 9.63 3.53E-20 Box Plot
THCA rs9682382 chr3:90342103 C/A STX19 chr3:93733213-93747454:- 0.45 6.47 2.42E-10 Box Plot
THCA rs9687260 chr5:45759876 A/G LOC647121 chr1:121260910-121313686:+ 0.38 8.02 8.3E-15 Box Plot
THCA rs9688294 chr5:18520930 A/G WDR44 chrX:117480036-117583924:+ -0.17 -6.09 2.34E-9 Box Plot
THCA rs9692138 chr7:140149793 C/T LOC441455 chr9:99488103-99489749:+ 0.5 6.77 3.74E-11 Box Plot
THCA rs9692631 chr8:11790320 G/A SGK223 chr8:8175258-8244008:- -0.45 -8.45 3.6E-16 Box Plot
THCA rs9692662 chr8:11789863 C/T SGK223 chr8:8175258-8244008:- -0.45 -8.45 3.6E-16 Box Plot
THCA rs9692668 chr8:11789933 C/A SGK223 chr8:8175258-8244008:- -0.45 -8.45 3.6E-16 Box Plot
THCA rs9692716 chr8:11790411 C/T SGK223 chr8:8175258-8244008:- -0.46 -8.62 9.87E-17 Box Plot
THCA rs9693857 chr8:9267117 C/T SGK223 chr8:8175258-8244008:- 0.39 7.49 3.46E-13 Box Plot
THCA rs9693925 chr8:11789963 A/G SGK223 chr8:8175258-8244008:- -0.45 -8.45 3.6E-16 Box Plot